PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0370s0020.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 198aa    MW: 21542.2 Da    PI: 4.8753
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0370s0020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.6e-1867117255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           y+GVr ++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+++ +g
  Kalax.0370s0020.1.p  67 SYRGVRKRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAETAALAYDQAALAARG 117
                          69*******.**********44465..***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.30E-2166126No hitNo description
SuperFamilySSF541711.37E-2167126IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.5E-3067126IPR001471AP2/ERF domain
SMARTSM003803.4E-3367131IPR001471AP2/ERF domain
PROSITE profilePS5103222.64267125IPR001471AP2/ERF domain
PfamPF008472.7E-1267117IPR001471AP2/ERF domain
PRINTSPR003673.1E-106879IPR001471AP2/ERF domain
PRINTSPR003673.1E-1091107IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MQLLSILLDL DSSASSSSPS CISNEPASWI PDERETTSPS EQSSPKDEGV ADNANPASKR  60
KQENEKSYRG VRKRPWGKFA AEIRDSTRNG VRVWLGTFDS AETAALAYDQ AALAARGSAA  120
VLNFPEEIVR RSLEGMIGRG EADGCSPVLA LKKKHMTKRR SMSSGKSMAP KEEEESVMVL  180
EDLGTEYLEE LLMISIM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-2766128466ATERF1
3gcc_A4e-2766128466ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016567928.14e-54PREDICTED: ethylene-responsive transcription factor 1B-like
RefseqXP_007206287.11e-53hypothetical protein PRUPE_ppa016384mg
SwissprotQ8LDC81e-50ERF92_ARATH; Ethylene-responsive transcription factor 1B
TrEMBLM5W2C01e-53M5W2C0_PRUPE; Uncharacterized protein
STRINGSolyc09g066360.1.11e-50(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-37ethylene response factor 1